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smehringer
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SViper
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
BSD 3-Clause "New" or "Revised" License
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[FIX] Fix vcf output by adding the filter info for SKIP.
#26
smehringer
closed
1 year ago
0
[FIX,DOC] Fix help page version to 2.1.0.
#25
smehringer
closed
1 year ago
0
[FIX] fix transform_cigar_right_into_insertion if ref_pos == until.
#24
smehringer
closed
1 year ago
1
Segmentation fault for few SVs
#23
Han-Cao
closed
1 year ago
3
some queries about SViper
#22
prasundutta87
opened
2 years ago
3
encounter the memory allocation problem
#21
shuliliu
opened
3 years ago
3
Installation error
#20
aserres
opened
3 years ago
4
Move writing custom filter messages to a separate function so other t…
#19
joshuak94
closed
4 years ago
0
Feature pbsv format
#18
smehringer
closed
4 years ago
0
Fix for empty sequence case in long reads.
#17
joshuak94
closed
4 years ago
0
Add command to print option values to log file.
#16
joshuak94
closed
4 years ago
0
Any chance of support for duplications and inversions?
#15
oneillkza
closed
3 years ago
3
Able to deal with the VCF file produced by PBSV?
#14
JunpengShi
closed
4 years ago
8
Add threads and output prefix to option constructor.
#13
joshuak94
closed
4 years ago
3
Bug fix
#12
joshuak94
closed
4 years ago
0
Move all of include/ into include/SViper/, so that other projects can…
#11
joshuak94
closed
4 years ago
6
Check first if SVLEN=- exists.
#10
joshuak94
closed
4 years ago
5
Remove using namespace seqan
#9
joshuak94
closed
4 years ago
2
Separate main function.
#8
joshuak94
closed
4 years ago
6
[FIX] Remove quotation marks around FILTER field IDs in VCF output
#7
eldariont
closed
5 years ago
0
Command line parameters for FAIL5 thresholds
#6
eldariont
closed
3 years ago
2
Missing VCF header lines
#5
eldariont
closed
4 years ago
7
[FIX] Hard-clips should not advance read_pos
#4
hannespetur
closed
6 years ago
1
Use SViper without short reads
#3
tungufoss
opened
6 years ago
5
[README, MINOR, FIX, PLEASE, INTERNAL] Incorrect git link
#2
hannespetur
closed
6 years ago
3
SViper 2.0.0
#1
smehringer
closed
6 years ago
0