mzlib 541 release notes:
Added support for Bruker data https://github.com/smith-chem-wisc/mzLib/pull/702
Fixed chemical formula bug
Update to uniprot ptmlist.txt loader
Fixed xml.gz compression bug so we load complete xml
Improved comments in FlashLFQ
Added support for FlashDecon and TopFD file parsing
New method to check valid amino acid sequence to help with reading data from outside programs
Improved ability of FlashLFQ to handle unusual characters in file input
Added support for negative deconvolution
I ran the vignette data with the existing release and with this PR. Then I plotted to log2 protein intensity ratios against one another. We do get a slightly increased number of protein intensities as expected.
mzlib 541 release notes: Added support for Bruker data https://github.com/smith-chem-wisc/mzLib/pull/702 Fixed chemical formula bug Update to uniprot ptmlist.txt loader Fixed xml.gz compression bug so we load complete xml Improved comments in FlashLFQ Added support for FlashDecon and TopFD file parsing New method to check valid amino acid sequence to help with reading data from outside programs Improved ability of FlashLFQ to handle unusual characters in file input Added support for negative deconvolution
I ran the vignette data with the existing release and with this PR. Then I plotted to log2 protein intensity ratios against one another. We do get a slightly increased number of protein intensities as expected.