smith-chem-wisc / MetaMorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
MIT License
90 stars 45 forks source link

Glyco write individual file results #2252

Closed trishorts closed 1 year ago

trishorts commented 1 year ago

Last step before I add label free quant to the glyco search task. This PR just splits the results into individual file folders for those users that want such a thing. It is similar to the individual file folder results of search task.

codecov[bot] commented 1 year ago

Codecov Report

Merging #2252 (67e6144) into master (a27026f) will increase coverage by 0.37%. The diff coverage is 95.95%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #2252      +/-   ##
==========================================
+ Coverage   91.43%   91.80%   +0.37%     
==========================================
  Files         134      134              
  Lines       20153    20185      +32     
  Branches     2807     2815       +8     
==========================================
+ Hits        18427    18531     +104     
+ Misses       1237     1173      -64     
+ Partials      489      481       -8     
Impacted Files Coverage Δ
...gineLayer/ClassicSearch/MiniClassicSearchEngine.cs 92.14% <ø> (ø)
...TaskLayer/GlycoSearchTask/GlycoSearchParameters.cs 100.00% <ø> (ø)
...eus/TaskLayer/SearchTask/PostSearchAnalysisTask.cs 92.50% <ø> (ø)
...yer/GlycoSearchTask/PostGlycoSearchAnalysisTask.cs 92.76% <95.91%> (+12.76%) :arrow_up:
...TaskLayer/GlycoSearchTask/GlycoProteinParsimony.cs 76.36% <100.00%> (ø)

... and 4 files with indirect coverage changes

acesnik commented 1 year ago

The code changes look good. I haven't tested the GUI or functionality.