smith-chem-wisc / MetaMorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
MIT License
90 stars 46 forks source link

should we have file specific normalized collision energy NCE #2265

Open trishorts opened 1 year ago

trishorts commented 1 year ago

because fragmentation can vary so significantly with NCE. I think we can NCE specific fragment libraries.