codecov[bot]
commented
1 year ago Codecov Report
Merging #2273 (882ecdc) into master (7dfe22b) will decrease coverage by
0.12%. The diff coverage is93.19%.:exclamation: Current head 882ecdc differs from pull request most recent head 59c4cad. Consider uploading reports for the commit 59c4cad to get more accurate results
@@ Coverage Diff @@
## master #2273 +/- ##
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- Coverage 92.02% 91.90% -0.12%
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Files 135 134 -1
Lines 20602 20343 -259
Branches 2828 2829 +1
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- Hits 18958 18696 -262
Misses 1161 1161
- Partials 483 486 +3 | Impacted Files | Coverage Δ | |
|---|---|---|
| ...eLayer/SpectralRecovery/MiniClassicSearchEngine.cs | 91.25% <91.25%> (ø) |
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| ...eLayer/SpectralRecovery/SpectralRecoveryResults.cs | 95.32% <92.10%> (ø) |
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| ...eus/TaskLayer/SearchTask/PostSearchAnalysisTask.cs | 92.06% <92.30%> (-1.31%) |
:arrow_down: |
| ...ngineLayer/SpectralRecovery/SpectralRecoveryPSM.cs | 93.92% <93.92%> (ø) |
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| MetaMorpheus/TaskLayer/SpectralRecoveryRunner.cs | 94.11% <97.36%> (ø) |
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| MetaMorpheus/EngineLayer/PeptideSpectralMatch.cs | 98.86% <100.00%> (+0.02%) |
:arrow_up: |
| MetaMorpheus/EngineLayer/PsmTsv/PsmTsvHeader.cs | 100.00% <100.00%> (ø) |
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| MetaMorpheus/TaskLayer/MetaMorpheusTask.cs | 87.26% <100.00%> (-0.02%) |
:arrow_down: |
| ...skLayer/SearchTask/PostSearchAnalysisParameters.cs | 100.00% <100.00%> (ø) |
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| ...aMorpheus/TaskLayer/SearchTask/SearchParameters.cs | 100.00% <100.00%> (ø) |
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| ... and 1 more |
Previously, spectral recovery was dependent on deconvolution. The updated version uses isolation windows, not deconvoluted precursors, to locate Ms2 spectra associated with MBR-transferred identifications.
This change results in increased performance, as measured by the spectral contrast angle between the recovered and donor spectrum. Tests were edited to account for this.