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smith-chem-wisc / MetaMorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
MIT License
90 stars 45 forks source link

Update pep #2344

Closed trishorts closed 4 months ago

codecov[bot] commented 4 months ago

Codecov Report

Attention: 5 lines in your changes are missing coverage. Please review.

Comparison is base (8d10e39) 92.65% compared to head (9f62af9) 92.70%.

:exclamation: Current head 9f62af9 differs from pull request most recent head 6e813dd. Consider uploading reports for the commit 6e813dd to get more accurate results

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344/graphs/tree.svg?width=650&height=150&src=pr&token=m0HXyK8tFy&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc)](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc) ```diff @@ Coverage Diff @@ ## master #2344 +/- ## ========================================== + Coverage 92.65% 92.70% +0.04% ========================================== Files 137 137 Lines 21274 21230 -44 Branches 2928 2923 -5 ========================================== - Hits 19712 19681 -31 + Misses 1083 1067 -16 - Partials 479 482 +3 ``` | [Files](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc) | Coverage Δ | | |---|---|---| | [MetaMorpheus/EngineLayer/PsmTsv/PsmTsvWriter.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL1BzbVRzdi9Qc21Uc3ZXcml0ZXIuY3M=) | `97.47% <100.00%> (-0.10%)` | :arrow_down: | | [...us/TaskLayer/MbrAnalysis/SpectralRecoveryRunner.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL1Rhc2tMYXllci9NYnJBbmFseXNpcy9TcGVjdHJhbFJlY292ZXJ5UnVubmVyLmNz) | `91.46% <100.00%> (-0.05%)` | :arrow_down: | | [...EngineLayer/FdrAnalysis/PEPValueAnalysisGeneric.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL0ZkckFuYWx5c2lzL1BFUFZhbHVlQW5hbHlzaXNHZW5lcmljLmNz) | `95.83% <88.88%> (-0.13%)` | :arrow_down: | | [MetaMorpheus/EngineLayer/PeptideSpectralMatch.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL1BlcHRpZGVTcGVjdHJhbE1hdGNoLmNz) | `99.72% <96.15%> (+0.01%)` | :arrow_up: | | [...pheus/EngineLayer/FdrAnalysis/FdrAnalysisEngine.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2344?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL0ZkckFuYWx5c2lzL0ZkckFuYWx5c2lzRW5naW5lLmNz) | `97.15% <89.65%> (+5.73%)` | :arrow_up: |