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smith-chem-wisc / MetaMorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
MIT License
90 stars 45 forks source link

Update to MzLib 1.0.549 #2369

Closed nbollis closed 1 month ago

nbollis commented 1 month ago

A simple version update to enable multiple distinct sets of custom fragment ions in the same MM run.

Other changes include .csproj files and an enum name change

codecov[bot] commented 1 month ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 92.79%. Comparing base (5ee8567) to head (f01f10e).

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369/graphs/tree.svg?width=650&height=150&src=pr&token=m0HXyK8tFy&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc)](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc) ```diff @@ Coverage Diff @@ ## master #2369 +/- ## ========================================== + Coverage 92.76% 92.79% +0.02% ========================================== Files 137 137 Lines 21166 21170 +4 Branches 2924 2924 ========================================== + Hits 19635 19645 +10 + Misses 1049 1045 -4 + Partials 482 480 -2 ``` | [Files](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc) | Coverage Δ | | |---|---|---| | [...gineLayer/ClassicSearch/MiniClassicSearchEngine.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369?src=pr&el=tree&filepath=MetaMorpheus%2FEngineLayer%2FClassicSearch%2FMiniClassicSearchEngine.cs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL0NsYXNzaWNTZWFyY2gvTWluaUNsYXNzaWNTZWFyY2hFbmdpbmUuY3M=) | `92.14% <100.00%> (ø)` | | | [MetaMorpheus/EngineLayer/MetaMorpheusEngine.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369?src=pr&el=tree&filepath=MetaMorpheus%2FEngineLayer%2FMetaMorpheusEngine.cs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL01ldGFNb3JwaGV1c0VuZ2luZS5jcw==) | `88.04% <100.00%> (+0.06%)` | :arrow_up: | | [...tralLibrarySearch/SpectralLibrarySearchFunction.cs](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369?src=pr&el=tree&filepath=MetaMorpheus%2FEngineLayer%2FSpectralLibrarySearch%2FSpectralLibrarySearchFunction.cs&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc#diff-TWV0YU1vcnBoZXVzL0VuZ2luZUxheWVyL1NwZWN0cmFsTGlicmFyeVNlYXJjaC9TcGVjdHJhbExpYnJhcnlTZWFyY2hGdW5jdGlvbi5jcw==) | `98.80% <100.00%> (+0.04%)` | :arrow_up: | ... and [2 files with indirect coverage changes](https://app.codecov.io/gh/smith-chem-wisc/MetaMorpheus/pull/2369/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=smith-chem-wisc)