Improvements for deploying on HPC clusters; single-end sequencing support

smith-chem-wisc / Spritz

Software for RNA-Seq analysis to create sample-specific proteoform databases from RNA-Seq data

https://smith-chem-wisc.github.io/Spritz/

MIT License

7 stars 11 forks source link

Closed acesnik closed 3 years ago

acesnik commented 3 years ago

Ability to use single-end RNA-Seq data
Ability to use a mix of single-end and paired-end RNA-Seq data
Use dotnet3.1 from conda instead of downloading it within the Docker container, so that all packages in Spritz are handled by conda