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smith-chem-wisc / Spritz

Software for RNA-Seq analysis to create sample-specific proteoform databases from RNA-Seq data
https://smith-chem-wisc.github.io/Spritz/
MIT License
7 stars 11 forks source link

Integration into snakepipes #219

Closed acesnik closed 2 years ago

acesnik commented 3 years ago

I made a pull request to bioconda (https://github.com/bioconda/bioconda-recipes/pull/29875#pullrequestreview-725248048), but it turns out that might not be the best home for Spritz. I got pointed to snakepipes as a possible home for easily downloading spritz with conda.

https://github.com/bioconda/bioconda-recipes/pull/29875#discussion_r685093297

So it might be worth making a PR here https://github.com/maxplanck-ie/snakepipes.

acesnik commented 2 years ago

Snakepipes doesn't consider themselves a place for general workflows and wouldn't consider merging spritz. https://github.com/maxplanck-ie/snakepipes/issues/782