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smithlabcode / falco

A C++ drop-in replacement of FastQC to assess the quality of sequence read data
https://falco.readthedocs.io
GNU General Public License v3.0
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show all positions with adapters - got rid of fastqc diff adapters le… #30

Closed Shelestova-Anastasia closed 2 years ago

Shelestova-Anastasia commented 2 years ago

Well, when I fixed https://github.com/smithlabcode/falco/issues/23 - I made output like fastqc.

Last days I analyzed bgi samples with different adapters length. I found out that fastqc (and my previous fix) omits the last positions for short adapters. Now I changed variable longest_adapter_size to shortest_adapter_size to fix this issue.