smithlabcode / ribotricer

A tool for accurately detecting actively translating ORFs from Ribo-seq data
http://doi.org/djv4
GNU General Public License v3.0
28 stars 8 forks source link

Bump pyfaidx from 0.6.3.1 to 0.6.4 #109

Closed dependabot[bot] closed 2 years ago

dependabot[bot] commented 2 years ago

Bumps pyfaidx from 0.6.3.1 to 0.6.4.

Release notes

Sourced from pyfaidx's releases.

v0.6.4

  • Migrated test suite from nose to pytest
  • Removed some deprecated function calls (#185)
  • Added support for pathlib.Path (#184)
Commits
  • b6ca41b Merge pull request #185 from mdshw5/develop
  • 5a81446 Use setuptools to replace deprecated distutils version comparison
  • a440d98 Remove deprecated argument to random.shuffle
  • ede9a1b Run CI on master pushes and all PRs
  • ab92c84 Trigger on pull requests
  • 55d030e Update main.yml
  • 9470d98 Update README.rst
  • ec45189 Use simple assertions
  • fc9b16d use fixtures for all tests
  • 0c0b957 use fixtures for all tests
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)