smithlabcode / ribotricer

A tool for accurately detecting actively translating ORFs from Ribo-seq data
http://doi.org/djv4
GNU General Public License v3.0
28 stars 8 forks source link

Bump pysam from 0.19.0 to 0.19.1 #126

Closed dependabot[bot] closed 2 years ago

dependabot[bot] commented 2 years ago

Bumps pysam from 0.19.0 to 0.19.1.

Release notes

Sourced from pysam's releases.

pysam-v0.19.1

Release 0.19.1

This release wraps htslib/samtools/bcftools version 1.15.1.

  • #1104 add an add_samples() method to quickly add multiple samples to VCF.

Wheels are now built using manylinux_2_24

Changelog

Sourced from pysam's changelog.

Release 0.19.1

This release wraps htslib/samtools/bcftools version 1.15.1.

  • #1104 add an add_samples() method to quickly add multiple samples to VCF.
Commits
  • 5eac009 Merge pull request #1109 from pysam-developers/v0.19.1.x
  • 6b46709 update release notes, re-enable CICD for everything
  • a7440c7 Merge pull request #1092 from ajcr/add_allele_variant_types
  • 5b80eb4 Merge pull request #1105 from jmarshall/add_samples
  • 70ebdc0 Add VariantHeader.add_samples() method
  • 2f8dd9f Add new internal _hdr_sync() method encapsulating bcf_hdr_sync()
  • 040ce8b Check for several Cython #defines
  • bfd40b5 update and fix package names, 2
  • aaee0d6 update and fix package names
  • 8a6369f try manylinux_2_24 build, 4
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)