smithlabcode / ribotricer

A tool for accurately detecting actively translating ORFs from Ribo-seq data
http://doi.org/djv4
GNU General Public License v3.0
28 stars 8 forks source link

Bump pyfaidx from 0.6.4 to 0.7.0 #127

Closed dependabot[bot] closed 2 years ago

dependabot[bot] commented 2 years ago

Bumps pyfaidx from 0.6.4 to 0.7.0.

Release notes

Sourced from pyfaidx's releases.

v0.7.0

What's Changed

New Contributors

Full Changelog: https://github.com/mdshw5/pyfaidx/compare/v0.6.4...v0.7.0

Commits
  • 58d8b4e Update README.rst
  • 92c7e89 Merge pull request #193 from ap--/index_loc
  • 33500dc update readme with fsspec example
  • 5186b7f add fsspec tests for indexname
  • dd56de2 fix handling of OpenFile objects for manually provided indexname
  • 4c3be94 Add indexname kwarg to Faidx and Fasta
  • 3faada8 Merge pull request #190 from ap--/fsspec-support
  • e9526a0 remove unused import and capitalize Rewind class
  • 6b7d4c5 Merge pull request #191 from ap--/pytest-xfail
  • 7e49531 fsspec: stat is inconsistent
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)