search

smorabit / hdWGCNA

High dimensional weighted gene co-expression network analysis
https://smorabit.github.io/hdWGCNA/
Other
315 stars 31 forks source link

pbmc <- ModuleEigengenes( pbmc, group.by.vars = "Sample" ） # Error in !CheckWGCNAName(seurat_obj, wgcna_name) : invalid argument type #234

Closed Baozi9 closed 2 months ago

Baozi9 commented 2 months ago

Hi，When I run this line of code, there is an error, may I ask what is the problem? My Seutrat R package is 4.4 and hdWGCNA is 0.3.0. Is there a conflict between the two? If there is a conflict how to install the previous version of hdWGCNA?

drake77777 commented 2 months ago

Maybe you can just reinstall the hdWGCNA package, i ran into this error too, and i reinstalled the package as following code : devtools::install_github('smorabit/hdWGCNA', ref='dev'), problem solved! And i got seurat v4 and v5 both in different path, so it's probably not because the version of seurat.

smorabit commented 2 months ago

Closing because this is a duplicate issue, please see issue #233

Baozi9 commented 2 months ago

Maybe you can just reinstall the hdWGCNA package, i ran into this error too, and i reinstalled the package as following code : devtools::install_github('smorabit/hdWGCNA', ref='dev'), problem solved! And i got seurat v4 and v5 both in different path, so it's probably not because the version of seurat.

Thanks a lot! I"ll try it again!