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snakemake-workflows / cyrcular-calling

A Snakemake workflow for ecDNA detection in Nanopore or Illumina sequencing reads derived from DNA samples enriched for circular DNA.
https://snakemake.github.io/snakemake-workflow-catalog/?usage=snakemake-workflows/cyrcular-calling
MIT License
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fix: Expose gene annotation params #16

Open tedil opened 7 months ago

tedil commented 7 months ago

Expose flavor and branch in the config.yaml. Also update the config schema accordingly (and fix the varlociraptor fdr mode schema entries)