fix: set lowercase column names

snakemake-workflows / dna-seq-mtb

A flavor of https://github.com/snakemake-workflows/dna-seq-varlociraptor preconfigured for molecular tumor boards

MIT License

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Closed FelixMoelder closed 1 year ago

FelixMoelder commented 1 year ago

fix: column names need to be lowercase for being in line with the latest dna-seq-varlociraptor release.
fix: do not remove any splicing related candidate variant

FelixMoelder commented 1 year ago

Before merging we should wait for a new dna-seq-varlociraptor release including https://github.com/snakemake-workflows/dna-seq-varlociraptor/pull/247