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snakemake-workflows / dna-seq-varlociraptor

A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
MIT License
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feat: map to pangenome with vg #174

Open johanneskoester opened 1 year ago

johanneskoester commented 1 year ago

This needs to wait for vg >1.43.0 to be released.