A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
The workflow now fails with a message in case a empty bed file is created from custom target regions.
This might happen in case the custom file is invalid or empty.
The workflow now fails with a message in case a empty bed file is created from custom target regions. This might happen in case the custom file is invalid or empty.