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snakemake-workflows / dna-seq-varlociraptor

A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
MIT License
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fix: update to varlociraptor 5.4.1 #186

Closed johanneskoester closed 1 year ago

johanneskoester commented 1 year ago

This enables:

  1. definition of sexes other than female and male
  2. fix for rare issues where the reported VAF did not match the most likely event