A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
Due to an outdated version of SnpSift it may happen that some variants are getting lost when being annotated.
This issue seems to be fixed in the latest version of SnpSift.
Due to an outdated version of SnpSift it may happen that some variants are getting lost when being annotated. This issue seems to be fixed in the latest version of SnpSift.