A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
In some cases rendering the datavzrd report fails as the input datatable might not contain an id column.
This happens when splitting tables into noncoding and coding as empty columns are being dropped.
In some cases rendering the datavzrd report fails as the input datatable might not contain an
idcolumn. This happens when splitting tables into noncoding and coding as empty columns are being dropped.