A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
In some rare cases multiple transcripts for the same variant show up in the datavzrd report.
This happens in case the canonical and mane_plus_clinical fields state different transcripts as canonical.
As we can not identify the correct one we added both entries to the datavzrd report in the detail view showing black cells for supporting transcripts.
Additionally, a column for Enseml protein ID has been added.
In some rare cases multiple transcripts for the same variant show up in the datavzrd report. This happens in case the
canonical
andmane_plus_clinical
fields state different transcripts as canonical. As we can not identify the correct one we added both entries to the datavzrd report in the detail view showing black cells for supporting transcripts. Additionally, a column for Enseml protein ID has been added.