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snakemake-workflows / dna-seq-varlociraptor

A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
MIT License
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feat: Add improved visualization for clinical significance #301

Closed fxwiegand closed 1 month ago

fxwiegand commented 2 months ago

This PR adds improved visualization for clinical significance.

fxwiegand commented 2 months ago

@FelixMoelder Could you test this when you have some time and update the color mapping https://github.com/snakemake-workflows/dna-seq-varlociraptor/blob/23c3404e1984350fb3dd108fabf1a1edfab65653/workflow/resources/datavzrd/clinical_significance.js#L3-L18 to your liking?

johanneskoester commented 1 month ago

Cool, badges!

FelixMoelder commented 1 month ago

Thanks for adding this. I just did some minor changes to the coloring and this looks really helpful now!