test if SIGNOR database can be used by SPIA pathway enrichment analysis

snakemake-workflows / rna-seq-kallisto-sleuth

A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

MIT License

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test if SIGNOR database can be used by SPIA pathway enrichment analysis #15

Open dlaehnemann opened 4 years ago

dlaehnemann commented 4 years ago

Check if we can get the curated SIGNOR database into a format that SPIA can use for its pathway enrichment analysis. It probably makes sense to start from this:

https://signor.uniroma2.it/getPathwayData.php?relations