snakemake-workflows / rna-seq-star-deseq2

RNA-seq workflow using STAR and DESeq2
MIT License
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fix: make specification of SRA samples in samples.tsv work (common.smk) #63

Closed dlaehnemann closed 1 year ago

dlaehnemann commented 1 year ago

Previously, u was restricted to columns ["fq1", "fq2"] and any found entry dropped altogether if both entries are NA. Now, this simply selects one entry in samples.tsv and all the necessary columns should still be there for proper handling in the following lines.

closes #52