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snakemake-workflows / transcriptome-differential-expression

long read differential expression analysis
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Fix/conda lookup #11

Closed cmeesters closed 6 months ago

cmeesters commented 6 months ago

the rule dump_versions was broken, because the env variable MAMBA_EXE does not exist in every environment.

Now, ensureconda was introduced in the environment and in the rule to look up the conda flavour a user has installed. This is used to dump the software versions.