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snakemake
/
snakefmt
The uncompromising Snakemake code formatter
MIT License
153
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29
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feat: add retries to grammar
#145
maarten-k
closed
2 years ago
4
Decorated functions lead to error
#144
holtgrewe
closed
1 year ago
4
Two empty lines for each include in Snakefile
#143
alethomas
closed
2 years ago
5
chore: release 0.6.0
#142
github-actions[bot]
closed
2 years ago
1
feat: add template_engine keyword in order to support Snakemake 7
#141
johanneskoester
closed
2 years ago
1
chore: release-please machinery
#140
johanneskoester
closed
2 years ago
6
Snakefmt fails when config file is missing
#139
GiulioCentorame
closed
2 years ago
2
docs: Minor fix to editor integration
#138
je3we3
closed
2 years ago
1
feat: add template_engine keyword from Snakemake 7.0
#137
johanneskoester
closed
2 years ago
4
fix: Lambda keyword args, improve errors, and nested madness
#136
mbhall88
closed
2 years ago
12
Keyword argument in lambda causing InvalidParameterSyntax
#135
mbhall88
closed
2 years ago
0
Release v0.5.0
#134
mbhall88
closed
2 years ago
1
Update to stable release of black
#133
mbhall88
closed
2 years ago
1
Remove dependency to click <8.0.0 ?
#132
nvuillam
closed
2 years ago
4
Support new snakemake keywords `prefix` and `default_target`
#131
koen-vg
closed
2 years ago
11
prefix keyword in module declaration not recognised
#130
koen-vg
closed
2 years ago
0
edge case: shell cmd prefix
#129
siebrenf
opened
2 years ago
0
more if-else errors
#128
siebrenf
closed
2 years ago
2
Error feedback suggestions
#127
siebrenf
closed
2 years ago
1
egde case: nesting + ruleorder + comment
#126
siebrenf
closed
2 years ago
2
empty named entry in parameter list is deleted
#125
Hugovdberg
closed
1 year ago
1
snakefmt adds wrong indentation
#124
FelixMoelder
closed
1 year ago
8
snakefmt corrupts heredoc string
#123
dariober
closed
2 years ago
18
Fix 121
#122
bricoletc
closed
3 years ago
1
Increased indenting of shell strings
#121
mbhall88
closed
3 years ago
1
Add spacing in multiline strings
#120
mbhall88
closed
3 years ago
3
Print files with changes when performing --check
#119
johanneskoester
closed
3 years ago
2
snakefmt issue related to black
#118
fgypas
closed
3 years ago
11
Add missing handover keyword
#117
mbhall88
closed
3 years ago
2
Upgrade black to 21.7b0
#116
jalaziz
closed
3 years ago
9
Can you help me to understand the output of snakefmt when it returns an error?
#115
SilasK
closed
2 years ago
4
Syntax Error with `checkpoint rule`
#114
brcopeland
closed
3 years ago
2
Fix three parsing bugs and bump version
#113
bricoletc
closed
3 years ago
4
snakefmt IndexError: list index out of range
#112
fgypas
closed
3 years ago
5
unexpected spaces without warning
#111
lpagie
closed
3 years ago
1
Change main branch name in GitHub actions
#110
GiulioCentorame
closed
3 years ago
3
Incorrect format with unpacking input
#109
GianlucaFicarelli
closed
3 years ago
2
`snakefmt.exceptions.InvalidParameterSyntax` raised for `resources` directive
#108
kpj
closed
3 years ago
1
Release 0.4.1
#107
bricoletc
closed
3 years ago
2
Extraneous whitespace after use rule
#106
Hugovdberg
closed
3 years ago
1
Error message raised in snakemake-workflow-catalogue
#105
franciscozorrilla
closed
1 year ago
3
Empty rule keywords raises error
#104
alienzj
closed
1 year ago
13
multiple anonymous rules raise error
#103
SultanOrazbayev
closed
3 years ago
4
snakemake keywords in 'if' throws an error
#102
patfiaux
closed
3 years ago
2
ModuleNotFoundError: No module named 'snakefmt.config'
#101
tinyheero
closed
2 years ago
2
Support for snakemake ^6.0.0
#100
bricoletc
closed
3 years ago
2
Adapt to module syntax of upcoming Snakemake 6.0
#99
johanneskoester
closed
3 years ago
4
Remove Dockerfile
#98
mbhall88
closed
3 years ago
3
Update click, toml and black (major version) to latest releases
#97
jeremiahpslewis
closed
3 years ago
5
Error with nested else statement, InvalidPython
#96
supermaxiste
closed
3 years ago
2
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