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snakemake / snakemake-executor-plugin-googlebatch

Snakemake executor plugin for Google Batch
MIT License
3 stars 5 forks source link

feat: Add support for customer compute service account (#51, @hnawar) #52

Closed johanneskoester closed 3 months ago

johanneskoester commented 3 months ago

Test for PR #51.

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coderabbitai[bot] commented 3 months ago

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Commits Files that changed from the base of the PR and between b57fbdbdc85d4287feb3aee0c7c7947f378e6a47 and 4ee057c52a8d46b9d95ba551e527d27b5871c6e2.

Walkthrough

The recent changes enhance the Snakemake executor plugin for Google Cloud Batch by adding support for custom service accounts. Users can now specify a service account email in the documentation, which is integrated into the executor's settings and job allocation policies, improving flexibility and security in managing cloud resources. Additionally, the .gitignore file has been updated to exclude the poetry.lock file, reflecting a change in dependency management practices.

Changes

File Change Summary
.gitignore Added poetry.lock to ignore list to prevent tracking of the dependency lock file.
docs/further.md Introduced googlebatch_service_account parameter in hello_world rule for specifying service accounts.
snakemake_executor_plugin_googlebatch/... Added service_account attribute to ExecutorSettings class for optional service account email.
snakemake_executor_plugin_googlebatch/... Enhanced get_allocation_policy method and added get_service_account method for service account management.
tests/init.py Updated import statements and return type of get_remote_execution_settings method to reflect new module organization.

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