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snakemake / snakemake-executor-plugin-slurm

A Snakemake executor plugin for submitting jobs to a SLURM cluster
MIT License
18 stars 19 forks source link

docs: requeue #153

Closed cmeesters closed 1 month ago

cmeesters commented 1 month ago

only documenting what is new in v0.11.0 (see #152 )

Summary by CodeRabbit

coderabbitai[bot] commented 1 month ago

Walkthrough

The pull request introduces new command line flags for the SLURM executor plugin, specifically --slurm_init_seconds_before_status_checks and --slurm_requeue. These flags enhance job management by allowing users to adjust the timing of initial job status checks and enabling automatic resubmission of jobs that fail or are preempted. Additionally, the document clarifies existing options related to job retries and emphasizes the importance of dynamic parameterization for resource allocation.

Changes

File Change Summary
docs/further.md Added --slurm_init_seconds_before_status_checks and --slurm_requeue flags; clarified retries section.

Possibly related PRs

Suggested reviewers

🐰 In the meadow where bunnies hop,
New flags for SLURM help jobs not stop.
With retries and requeues, oh what a treat,
Dynamic adjustments make work feel complete!
Hooray for the changes, let's all cheer,
For smoother job handling throughout the year! 🌼

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cmeesters commented 1 month ago

Would be nice if one of you would find the time to review. Thank you!

cmeesters commented 1 month ago

Thanks for the updates!

Thank you for your prompt review and the lectoring!