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snakemake / snakemake-executor-plugin-slurm

A Snakemake executor plugin for submitting jobs to a SLURM cluster
MIT License
9 stars 13 forks source link

srun: error: slurm_init_msg_engine_port error Address already in use #24

Closed y9c closed 4 months ago

y9c commented 5 months ago

This error occurs by chance.

snakemake version 8.2.0

srun: error: slurm_init_msg_engine_port error Address already in use
cmeesters commented 5 months ago

I apologize for being so late with my reply. This

This error occurs by chance.

is not really helpful, as I am sure you are aware of. Please update to the latest release and indicate the command you have been using. Perhaps a minimal input to generate the error, too (if you can get hold of the issue, that is)? It would be splendid!

I know, it is at times difficult to provoke a bug, which does not show itself consistently.

y9c commented 5 months ago

Thank you for your suggestion. I am not sure what triggered this bug and it is hard to reproduce. I will update this issue when I have more clue about this.

cmeesters commented 4 months ago

Please update to the most current versions of Snakemake and this plugin. I will close this issue, now. Feel free to open it, when such an error occurs again.