Closed w8jcik closed 3 months ago
I'm afraid I could reproduce this issue.
We are working on a fix - actually this has been fixed, should be covered by a test case and still, it reoccurred. My apologies.
Thank you for your patience - I was absent and could not test.
Please update to the latest version of Snakemake: The parsing is now stable.
Thank you for help. It works now.
Just for verbosity, the issue have been fixed between version 8.10.2 and 8.10.4, most likely 8.10.2.
I tested that it works with 8.10.4.
There is one more problem with specifying GPU types, but I am creating a separate issue https://github.com/snakemake/snakemake-executor-plugin-slurm/issues/58.
As previously reported
Snakemake 8.9 still fails to submit jobs to a Slurm cluster when requesting GPU resources.
profiles/default/config.yaml
Versions
snakemake-executor-plugin-slurm@0.4.2