snakemake / snakemake-github-action

A Github action for running a Snakemake workflow
MIT License
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How to save output of list-untracked #27

Open hepcat72 opened 1 year ago

hepcat72 commented 1 year ago

I'm trying to make a GitHub action before and after a flow so that I can do a diff of the list-untracked before and after a flow runs so that I can ensure that output files are always all accounted for. But I can't figure out how to obtain the stderr output using this snake make action.