Questions about split and the experiment results - Githubissues

snap-stanford / GEARS

GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations

MIT License

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Questions about split and the experiment results #55

Closed yu3jun closed 5 months ago

yu3jun commented 6 months ago

Hi ! Thank you for publishing such an excellent paper !

I'm trying to follow your job in Gears, but I have some quesitions due to my limited knowledge, I would appreciate it very much if you could give some help. The questions are as follows:

What does the simulation mean in the split , and what's the difference between simulation_single and single?

split [single] use for the dataset[replogle_k562_essential and replogle_rpe1_essential]
split [combo_seen0,combo_seen1,combo_seen2] use for the dataset [norman]

Please correct me if I'm wrong.

Where can I get the detailed experimental result for the figure in your paper, as the paper only provided the gap between Gears and other baselines, without providing specific indicators for them.

Thank you very much for your consideration!