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snap-stanford / UCE

UCE is a zero-shot foundation model for single-cell gene expression data
MIT License
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Can I adjust the dimensions of the output from 1280 to 512? #40

Closed Jersey1234 closed 1 month ago

Jersey1234 commented 1 month ago

Can I adjust the dimensions of the output from 1280 to 512?

Yanay1 commented 1 month ago

The dimensions for a given trained model are fixed. You can do dimensionality reduction after generating the embeddings from 1280 to 512 or some other value using a number of different methods (like PCA, or auto encoders).