Hi,
How can I add another contaminant genome in the database?
The easiest way seems to be to add it in the known-contam folder, making the database file with blast++ and modifying lines 91 and 105 of the file contam.py from for target in ["hg38", "phix"]: to for target in ["hg38", "phix","newOne"]:.
Am I missing something?
Greg
Hi, How can I add another contaminant genome in the database? The easiest way seems to be to add it in the
known-contamfolder, making the database file with blast++ and modifying lines 91 and 105 of the filecontam.pyfromfor target in ["hg38", "phix"]:tofor target in ["hg38", "phix","newOne"]:. Am I missing something? Greg