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snayfach
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MicrobeCensus
MicrobeCensus estimates the average genome size of microbial communities from metagenomic data
http://genomebiology.com/2015/16/1/51
GNU General Public License v3.0
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does genome equivalents mean bacteria cell numbers
#33
diego00012138
opened
5 months ago
1
TypeError: cannot unpack non-iterable NoneType object in run_microbe_census.py
#32
shanexuuu
opened
5 months ago
4
differences with other normalization methods
#31
sapuizait
closed
1 year ago
2
Something wrong when put 'python setup.py install'
#30
Rooobben
closed
1 year ago
1
"Could not import module 'numpy'"
#29
smurdock-UVic
closed
1 year ago
3
TypeError: 'NoneType' object is not iterable
#28
cookiemonsterxxm
closed
4 years ago
5
MicrobeCensus is not using all the reads when set to a large number
#27
jolespin
closed
4 years ago
3
question: calculation of RPKG
#26
jzrapp
closed
4 years ago
1
making sense of results...
#25
jzrapp
closed
4 years ago
3
How the performance would be for metatranscriptomes?
#24
SilentGene
closed
5 years ago
2
Gene Sequences in Fasta
#23
dcdanko
closed
5 years ago
2
problem reading multiple files
#22
slhogle
closed
5 years ago
9
Fix #20 for Python 2/3 compatibility
#21
nigiord
closed
6 years ago
1
Python2 dependency in conda
#20
nigiord
closed
6 years ago
1
Test failed
#19
slschnorr
closed
6 years ago
3
could not convert string to float: FIRM56_P641593085
#18
chengdai
closed
5 years ago
4
Installation on a cluster redux
#17
sturne29
closed
6 years ago
6
Fix exception syntax according to PEP-3110
#16
boulund
closed
6 years ago
0
Pip install error from official 1.1.0 tarball
#15
boulund
closed
6 years ago
4
training.py: Unused test set?
#14
psaxcode
closed
7 years ago
3
Doc request: TMPDIR
#13
taltman
closed
7 years ago
1
installation on a cluster
#12
Thomieh73
closed
8 years ago
2
temp files when program exits of error
#11
jenmobberley
closed
8 years ago
1
MC should use the Unix exit code convention
#10
taltman
closed
9 years ago
1
MicrobeCensus should use requested # of cores
#9
taltman
closed
8 years ago
1
run_microbe_census.py crashes when input file not found
#8
taltman
closed
9 years ago
1
Feature Request: command line parameter to control subsampling
#7
taltman
closed
9 years ago
1
You're living in the past, man
#6
taltman
closed
9 years ago
1
Feature Request: Add support for DIAMOND
#5
taltman
closed
9 years ago
1
MicrobeCensus crashes, "ValueError: Sequence and quality captions differ."
#4
taltman
closed
8 years ago
17
Could not import module 'pkg_resources'
#3
tallnutt
closed
9 years ago
2
Update setup.py
#2
lowks
closed
9 years ago
0
Handling errors with command line parameters
#1
LBragg
closed
9 years ago
1