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sneumann / Rdisop

This is the git repository matching the Bioconductor package Rdisop: Decomposition of Isotopic Patterns
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error on mavericks #2

Closed sonali-bioc closed 9 years ago

sonali-bioc commented 9 years ago

Rdisop is failing on Mac Mavericks: http://www.bioconductor.org/checkResults/3.0/bioc-LATEST/Rdisop/perceval-install.html

Please fix asap to be part of the Bioconductor 3.0 release!

Thanks, Sonali (Bioconductor Team)

sneumann commented 9 years ago

Dear Sonali,

this error occurs after every update to Rcpp on the build machines. Please re-install RcppClassic on perceval from source, there is nothing I can do from here.

-------- Forwarded Message -------- From: Steffen Neumann sneumann@ipb-halle.de To: Dan Tenenbaum dtenenba@fhcrc.org Subject: Re: Rdisop build failure on Snow Leopard in release and devel Date: Fri, 01 Aug 2014 11:03:25 +0200

Dear Dan, can you check http://lists.r-forge.r-project.org/pipermail/rcpp-devel/2014-February/007143.html and build RcppClassic from source ?

Thanks, Steffen

sneumann commented 9 years ago

Thanks Sonali, this seems to have fixed things:

Package 712/910 Hostname    OS / Arch   INSTALL BUILD   CHECK   BUILD BIN
Rdisop 1.25.1
Steffen Neumann
Snapshot Date: 2014-10-05 16:20:12 -0700 (Sun, 05 Oct 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Rdisop
Last Changed Rev: 93668 / Revision: 94987
Last Changed Date: 2014-08-28 00:53:39 -0700 (Thu, 28 Aug 2014)
    zin1    Linux (Ubuntu 12.04.4 LTS) / x86_64      OK      OK      OK     
moscato1    Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64     OK      OK      OK      OK 
perceval    Mac OS X Snow Leopard (10.6.8) / x86_64      OK      OK      OK      OK 
oaxaca  Mac OS X Mavericks (10.9.5) / x86_64     OK      OK      OK      OK