Hi,
An error occurred when I tried to install Rdisop from Bioconductor using BiocManager::install("Rdisop"). Here is the message displayed in the R console:
disop.cpp: In instantiation of ‘SEXPREC rlistScores(std::multimap<score_type, ims::ComposedElement, std::greater >, int) [with score_type = double; SEXP = SEXPREC]’:
disop.cpp:352:20: required from here
disop.cpp:685:19: error: format not a string literal and no format arguments [-Werror=format-security]
685 | Rf_error(exceptionMesg);
| ~~^~~~~
cc1plus: some warnings being treated as errors
make: *** [/usr/lib/R/etc/Makeconf:204: disop.o] Error 1
ERROR: compilation failed for package ‘Rdisop’
The downloaded source packages are in
‘/tmp/Rtmp5QgOZr/downloaded_packages’
Warning message:
In install.packages(...) :
installation of package ‘Rdisop’ had non-zero exit status
I can see on your GitHub repo that the commit 8805731 solved this issue. So I downloaded the source package from Bioconductor and applied the modification in disop.cpp as performed in this commit. The installation succeeds perfectly.
However, I prefer the installation of packages through Bioconductor to simplify the update. Do you know when this error will be corrected?
Hi, An error occurred when I tried to install Rdisop from Bioconductor using
BiocManager::install("Rdisop"). Here is the message displayed in the R console:I can see on your GitHub repo that the commit 8805731 solved this issue. So I downloaded the source package from Bioconductor and applied the modification in disop.cpp as performed in this commit. The installation succeeds perfectly.
However, I prefer the installation of packages through Bioconductor to simplify the update. Do you know when this error will be corrected?
Thanks in advance.