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sneumann / mzR

This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)
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CHECK error on macOS testthat: dims [product 86616] do not match [43308] #243

Open sneumann opened 3 years ago

sneumann commented 3 years ago

Hi, related to #220 we have an error on macOS CHECK: http://bioconductor.org/checkResults/devel/bioc-LATEST/mzR/machv2-checksrc.html

  1 Test Suite : 
  mzR RUnit Tests - 40 test functions, 1 error, 0 failures
  ERROR in test_writeMSData: Error in object@backend$getPeakList(scans) : 
    dims [product 86616] do not match the length of object [43308]

  Test files with failing tests

     test_write.R 
       test_writeMSData

Ah, and also in release: http://bioconductor.org/checkResults/release/bioc-LATEST/mzR/merida1-checksrc.html

On Windows these Errors were transient and disappeared after a while. Yours, Steffen

jorainer commented 3 years ago

I remember that such errors appear from time to time - no idea why. the error comes from proteowizard and I have no clue how this could be reproduced or fixed.

sneumann commented 3 years ago

Indeed, that was mostly to keep track of it, and has already disappeared again. Yours, Steffen