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snijderlab / stitch

Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling
MIT License
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Spectrum viewer have a way to show raw values #198

Closed douweschulte closed 2 years ago

douweschulte commented 2 years ago

Create a table with per matched fragment all information on that fragment. For now this should at minimal include: intensity, mz, mz error (difference between PeptideFragment (theoretical) and Centroid) and all other stuff that pops up in the meantime. This should be easy to fold in or something to keep it out of the way of unsuspecting users.

douweschulte commented 2 years ago

image Implemented with some initial columns, could be easily extended in the future.

douweschulte commented 2 years ago

Extra idea: add all 'background' or unassigned peaks in the fragment table as well, but leave them filtered out so it does not clutter the interface. It would be best to have a generalized filtering out system akin to the excel sorted table one.

douweschulte commented 2 years ago

Implemented