In discussion the idea arose to add an extra step after template matching which again matches all reads to the template, this should improve the final consensus sequence. Also detecting how many more reads could be placed or how much higher the score gets could be a very promising means of selecting templates for recombination if that is done afterwards.
In discussion the idea arose to add an extra step after template matching which again matches all reads to the template, this should improve the final consensus sequence. Also detecting how many more reads could be placed or how much higher the score gets could be a very promising means of selecting templates for recombination if that is done afterwards.