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snijderlab / stitch

Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling
MIT License
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Mass alignment handle patches in consensus #220

Closed douweschulte closed 1 year ago

douweschulte commented 1 year ago

Make sure a patch is chosen when it has the highest confidence. And add some tests to verify this. Any patch change (isobaric/switch) should be taken as the consensus if it has highest confidence. Also think about how this scores.