sketches with k-mers but 0 bases

snipe-bio / snipe

Blazingly fast SRA-scale sequence analysis & QC

https://snipe-bio.github.io/snipe/

GNU Affero General Public License v3.0

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Open drtamermansour opened 3 weeks ago

drtamermansour commented 3 weeks ago

There are sketches with k-mer content but no snipe bases:

mr-eyes commented 3 weeks ago

probably retracted from the SRA. All currently available snipe-bases on the explore are parsed from the SRA metadata.

mr-eyes commented 3 weeks ago

not retracted, but unavailable on SRA. However found them on EBI.

drtamermansour commented 3 weeks ago

We need to re-sketch to auto-calculate the number of bases