Open sirenfrappe opened 4 years ago
when the sequence's length is larger than 2K, I got this error : ERROR: ERROR: Not enough memory to allocate variables!. I try to run it on other clusters which have bigger memory and remove some rows of the alignments file ,and doesnt work.
ERROR: ERROR: Not enough memory to allocate variables!
./CCMpred/bin/ccmpred -t 28 ./TLN2_HUMAN.aln ./TLN2_HUMAN.ccmpred _____ _____ _____ _ | | | |___ ___ ___ _| | | --| --| | | | . | _| -_| . | |_____|_____|_|_|_| _|_| |___|___| |_| using CPU (28 thread(s)) ERROR: ERROR: Not enough memory to allocate variables!
TLN2_HUMAN,aln has 21327 rows ,and the sequence's length is 2224.
related to: https://github.com/soedinglab/CCMpred/issues/17. Unfortunately, there is nobody developing CCMpred anymore, so the support I can provide is very limited.
when the sequence's length is larger than 2K, I got this error :
ERROR: ERROR: Not enough memory to allocate variables!
. I try to run it on other clusters which have bigger memory and remove some rows of the alignments file ,and doesnt work.TLN2_HUMAN,aln has 21327 rows ,and the sequence's length is 2224.