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soedinglab / CCMpred

Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
http://www.ncbi.nlm.nih.gov/pubmed/25064567
GNU Affero General Public License v3.0
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libconjugrad missing in packaged release 0.3.2 #7

Open jessica-andreani opened 7 years ago

jessica-andreani commented 7 years ago

I had to install CCMpred on a computer where I could not use git. When downloading and extracting the release (in my case v0.3.2.tar.gz) the lib/libconjugrad directory is empty, thus "cmake ." fails. The error message "CCMpred is missing the libconjugrad submodule! Please make sure to clone CCMpred according to the instructions in the README" and the README file are not very helpful in this situation. It would be great to either add more explicit instructions (libconjugrad can be downloaded from https://bitbucket.org/soedinglab/libconjugrad/downloads) or even better, include all files directly in the archive.

sseemayer commented 7 years ago

Hi Jessica, thanks for pointing this out! Will try to resolve this over the weekend.

UltraHector commented 6 years ago

Downloading the zip will still generate this issue. "CCMpred is missing the libconjugrad submodule!". As per the readme, one must use "--recursive" when clone from the git, which will download the "libconjugrad" source files as well. If you cannot use git on a computer, you can git clone the source onto a computer where you can and then copy the files to the computer where cannot.