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soedinglab / MMseqs2-App

MMseqs2 app to run on your workstation or servers
https://search.foldseek.com
GNU General Public License v3.0
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Full target/query alignment being truncated in web UI #50

Open scollins-at-indigo opened 2 years ago

scollins-at-indigo commented 2 years ago

Hi there, thanks for releasing such a useful and well built piece of software! I've found what appears to be a bug in the web UI where the alignments between target and query pairs seem to be consistently missing the last line of the alignment. See the attached pic. This alignment should show 376 aligned AA positions but it is truncated at 320 at the end of the last full line. I've tested this out with query/target pairs of varying length and same thing. The last partial line of alignment is missing. Thanks in advance for taking a look!

mmseqs_web_bug

milot-mirdita commented 2 years ago

This bug should be fixed in git. However, I didn't get around to make a new release yet.

scollins-at-indigo commented 2 years ago

Ok wonderful, any estimate for when you think you'll publish a new release? Thanks again.

milot-mirdita commented 2 years ago

I've rewritten the docker-compose stuff to use the github container registry. The new images contain the fix. Currently they always pull from the latest github version and thus don't require a real release. I might change that in the future to pin the images to a certain release. For now you should just be able to relaunch docker-compose with the newest containers.