soedinglab / MMseqs2-App

MMseqs2 app to run on your workstation or servers
https://search.foldseek.com
GNU General Public License v3.0
55 stars 18 forks source link

Pass --max-seqs through GUI or server API? #75

Open mezarque opened 1 year ago

mezarque commented 1 year ago

Thanks for building this nice search server! I've been using the FoldSeek search server to search through AlphaFold/Uniprot50 and am noticing that it always returns a maximum of 1000 hits.

Would there be a way to allow for changing the FoldSeek parameters for the webserver, either through the GUI or the API backend?

I noticed that you can set a database's mmseqs2 search parameters using database/ POST but I couldn't find a way to pass search parameters through the ticket/ POST API. It would be super nice to be able to set these kinds of parameters along with the ticket submission.