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soedinglab / hh-suite

Remote protein homology detection suite.
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-3019-7
GNU General Public License v3.0
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HHPRED databases should be an environmental variable by default #241

Open jshleap opened 3 years ago

jshleap commented 3 years ago

Hi, I work in a HPC platform where where users do not have write access the globally installed software stack. As hh-suite is right now, users cannot set the databases path for hhpred, and therefore will have to do a local install. Would it be a possibility to allow the databases be in an environmental variable so that the users can set it on their local paths?

Best,

milot-mirdita commented 3 years ago

Do you mean the hhpred perl scripts for structure prediction? That part of the hh-suite is currently completely unsupported as we our requests for continued funding were repeatedly denied.