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soedinglab / hh-suite

Remote protein homology detection suite.
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-3019-7
GNU General Public License v3.0
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Conda installation of hhsuite not working #242

Closed luederm closed 3 years ago

luederm commented 3 years ago

I am not sure where the best place to post this is, however I am currently unable to install hhsuite from conda.

Command: conda install -c bioconda hhsuite

Output:

Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: | Found conflicts! Looking for incompatible packages. This can take several minutes. Press CTRL-C to abort. failed

UnsatisfiableError: The following specifications were found to be incompatible with each other:

Output in format: Requested package -> Available versions

It is strange the there is no output after the last line. Maybe there is a bug in the repodata package specification.

I tested on mac with conda version 4.8.4 and linux with conda version 4.9.2.

milot-mirdita commented 3 years ago

You probably also need to specify -c conda-forge or make sure they are both among your conda default channels.

luederm commented 3 years ago

@milot-mirdita That worked. Thanks!

Perhaps the command listed at https://anaconda.org/bioconda/hhsuite could be updated to include conda-forge?