hhmakemodel.py is giving the not giving correct alignment file.
"Error while using alignment file generated by hhmakemodel.py"
return f(self.modpt, io.modpt, self.env.libs.modpt, eqvdst)
_modeller.ModellerError: rdmmcif_303E> No atoms were read from the
specified input MMCIF file, since the starting residue number and/or
chain id in MODEL_SEGMENT (or the alignment file header) was not
found; requested starting position: residue number " 1", chain " A";
atom file name: 2G0D.cif
Steps to Reproduce (for bugs)
while I used TvLDH fasta given the correct alignment , and modeller was able to model the structure
HH-suite Output (for bugs)
Please make sure to post the complete output of the tool you called. Please use gist.github.com.
Context
\While I have taken other sequence the alignment file is incorrect.
Your Environment
Include as many relevant details about the environment you experienced the issue in.
Version/Git commit used:
Server specifications (especially CPU support for AVX2/SSE and amount of system memory):
:exclamation: Make to check out our User Guide.
Expected Behavior
hhmakemodel.py is giving the not giving correct alignment file.
"Error while using alignment file generated by hhmakemodel.py" return f(self.modpt, io.modpt, self.env.libs.modpt, eqvdst) _modeller.ModellerError: rdmmcif_303E> No atoms were read from the specified input MMCIF file, since the starting residue number and/or chain id in MODEL_SEGMENT (or the alignment file header) was not found; requested starting position: residue number " 1", chain " A"; atom file name: 2G0D.cif
Steps to Reproduce (for bugs)
while I used TvLDH fasta given the correct alignment , and modeller was able to model the structure
HH-suite Output (for bugs)
Please make sure to post the complete output of the tool you called. Please use gist.github.com.
Context
\While I have taken other sequence the alignment file is incorrect.
Your Environment
Include as many relevant details about the environment you experienced the issue in.